Bioinformatics Databases & Tools
Articles
- The 2011 bioinformatics links directory update: more resources, tools and databases and features to empower the bioinformatics community
Databases
- NCBI
-- Entrez cross-database search page
-- PubMed Home
-- BLAST: Basic Local Alignment Search Tool
-- Conserved Domains and Protein Classification
-- Batch Entrez
- CD-HIT Suite
- ExPASy - PROSITE
- PDB
- Bioinformatics Links Directory
Structure Visualization
- PyMOL
- Structure of amino acids
Structure Modelling & Analysis
- SWISS-MODEL
- PDBsum web portal
Multiple Sequence Alignment tools
- PROMALS3D multiple sequence and structure alignment server
- MAFFT version 6
- ClustalW2
Sequence alignment editing program
- BioEdit Sequence Alignment Editor
- Jalview
ExPASy Tools
- ExPASy: ScanProsite tool
Other servers for ScanProsite:
ExPASy: ScanProsite tool (Mirror: Australia)
ExPASy: ScanProsite tool (Mirror: Korea)
ExPASy: ScanProsite tool (Mirror: Canada)
- PRATT
- MyDomains
EMBOSS
- EMBOSS: fuzzpro
NUS HPC
- NUS HPC Portal
- NUS HPCBIO Portal Login
- Check Job Status
Grid Computing
- EUAsiaGrid Portal
Conferences
Keynote Symposia on Molecular and Cellular Biology Accelerating Life Science Discovery
- Omics Meets Cell Biology
InCoB 2011 Malaysia
Asia Pacific Bioinformatics Network's 10th InCoB - 1st ISCB Asia Joint Conference 2011
- Full Paper Submission Information
ISCB - The Leading Professional Society for the New Era of Computational Biology
- History of ISCB
- ISCB Conferences
- - Great Lakes Bioinformatics Conference 2011
- - ISMB ECCB 2011
- - - Registration
- - - Call for posters – ISMB/ECCB 2011
F1000 - Posters
Concepts
- Scoring Matrices
- Understanding sensitivity and specificity with the right side of the brain
- Accuracy and Precision - Wikipedia
See Table 2 for "Definition of common measures for the accuracy of prediction systems" in Computational methods for prediction of T-cell epitopes—a framework for modelling, testing, and applications
- ChIP-Seq Transcription Factor Data
- Article: ChIP-sequencing (ChIP-seq)
- Article: Molecular Interaction map
- Article: mTOR signaling network
- Article: iRefIndex
Scientists
- Dr. Margaret Oakley Dayhoff -- Pioneer in Bioinformatics
- Wentian Li, Ph.D
Minimum Information for Biological and Biomedical Investigations
MIBBI: Minimum Information for Biological and Biomedical Investigations
Courses
A List of Bioinformatics Courses and Degrees Worldwide
Bioinformatics Degrees
ARC Centre of Excellence in Bioinformatics - 2010 Winter School in Mathematical and Computational Biology
Adding Bioinformatics to AP Bio
Websites
Bioinformatics.FR The ultimate web station
Books
Bioinformatics and Functional Genomics (second edition)
